Solyc08g082170.4.1

Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 425.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 74.0)

Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0005547 (SeedPlants) Phylogenetic Tree(s): OG_06_0005547_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g082170.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00141260	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	Archaeplastida
AMTR_s00209p00025840	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.05	Archaeplastida
AT3G16850	No alias	Pectin lyase-like superfamily protein	0.04	Archaeplastida
GSVIVT01019405001	No alias	Probable polygalacturonase OS=Vitis vinifera	0.04	Archaeplastida
LOC_Os02g54030.1	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.03	Archaeplastida
LOC_Os05g50960.1	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.03	Archaeplastida
LOC_Os12g36810.1	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.02	Archaeplastida
Zm00001e026646_P002	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004143	diacylglycerol kinase activity	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	143	420

External Links

No external refs found!

Solyc08g082170.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation