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  5. Solyc08g082910.2.1

Solyc08g082910.2.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g082910.2.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.08 Archaeplastida
AMTR_s00021p00057700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00169p00055880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.06 Archaeplastida
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 Archaeplastida
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.06 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.08 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01038591001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
Gb_12877 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g49440.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_74014g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_83624g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_939289g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Pp3c4_850V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e000526_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.09 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e023334_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e029641_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004555 alpha,alpha-trehalase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015927 trehalase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 39 96
No external refs found!