Solyc09g005240.3.1


Description : TOM1 tobamovirus multiplication replication host factor


Gene families : OG0000988 (Archaeplastida) Phylogenetic Tree(s): OG0000988_tree ,
OG_05_0000826 (LandPlants) Phylogenetic Tree(s): OG_05_0000826_tree ,
OG_06_0000920 (SeedPlants) Phylogenetic Tree(s): OG_06_0000920_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g005240.3.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g01250.1 No alias TOM1 tobamovirus multiplication replication host factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR009457 DUF1084 13 220
No external refs found!