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  5. Solyc09g005290.1.1

Solyc09g005290.1.1


Description : Putative disease resistance protein RGA1 OS=Solanum bulbocastanum (sp|q7xa42|rga1_solbu : 445.0)


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g005290.1.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000656001 No alias Putative disease resistance protein At3g14460... 0.04 Archaeplastida
GSVIVT01000871001 No alias Putative disease resistance RPP13-like protein 1... 0.06 Archaeplastida
GSVIVT01001453001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01001457001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01003817001 No alias Putative disease resistance RPP13-like protein 1... 0.08 Archaeplastida
GSVIVT01004021001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01004064001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01013535001 No alias Putative disease resistance RPP13-like protein 1... 0.07 Archaeplastida
GSVIVT01022931001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022962001 No alias Putative disease resistance protein RGA3 OS=Solanum bulbocastanum 0.07 Archaeplastida
GSVIVT01023011001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01031535001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01032171001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
GSVIVT01032180001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 Archaeplastida
GSVIVT01032189001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
GSVIVT01032199001 No alias Disease resistance protein RGA2 OS=Solanum bulbocastanum 0.05 Archaeplastida
GSVIVT01032210001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01038298001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 197 418
No external refs found!