1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g007650.3.1

Solyc09g007650.3.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g007650.3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.17 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.04 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.03 Archaeplastida
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.03 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.22 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.04 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.23 Archaeplastida
GSVIVT01020616001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01025167001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.24 Archaeplastida
GSVIVT01025660001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.2 Archaeplastida
GSVIVT01025662001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.17 Archaeplastida
GSVIVT01025663001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01025669001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01025671001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.17 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Gb_02823 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g06580.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os01g47780.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os02g20540.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os05g07060.1 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
LOC_Os05g48890.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os05g48900.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os09g30486.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
MA_5195g0010 No alias Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis... 0.05 Archaeplastida
MA_59950g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g048090.2.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e024362_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e024743_P001 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 57 190
No external refs found!