Solyc09g008260.3.1

Description : starch granule initiation factor (PTST3)

Gene families : OG0009374 (Archaeplastida) Phylogenetic Tree(s): OG0009374_tree ,
OG_05_0009693 (LandPlants) Phylogenetic Tree(s): OG_05_0009693_tree ,
OG_06_0012140 (SeedPlants) Phylogenetic Tree(s): OG_06_0012140_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g008260.3.1
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G03420	No alias	5'-AMP-activated protein kinase-related	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
BP	GO:0006282	regulation of DNA repair	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
MF	GO:0070567	cytidylyltransferase activity	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032640	AMPK1_CBM	410	458

External Links

No external refs found!