Solyc09g008440.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g008440.1.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00104280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AT1G02030 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.03 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT3G46080 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT3G53600 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
AT5G03510 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT5G04340 CZF2, ZAT6, C2H2 zinc finger of Arabidopsis thaliana 6 0.03 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.04 Archaeplastida
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.03 Archaeplastida
GSVIVT01018162001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01031461001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_06485 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g41390.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g60560.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g08060.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g02390.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os10g40660.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os11g47630.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os12g39400.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_167434g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_23050g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_93487g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g075775.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e001253_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e005777_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e006181_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e006184_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e011756_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e011983_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e019350_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e024331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028782_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e029605_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038054_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e038072_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e038074_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!