1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g008700.2.1

Solyc09g008700.2.1


Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0002131 (Archaeplastida) Phylogenetic Tree(s): OG0002131_tree ,
OG_05_0007571 (LandPlants) Phylogenetic Tree(s): OG_05_0007571_tree ,
OG_06_0009925 (SeedPlants) Phylogenetic Tree(s): OG_06_0009925_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g008700.2.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre06.g280300 No alias E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_22218 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Mp3g18370.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Mp7g02100.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida
Pp3c17_16520V3.1 No alias ubiquitin protein ligase 6 0.03 Archaeplastida
Zm00001e039899_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
CC GO:0030677 ribonuclease P complex IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902555 endoribonuclease complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1905348 endonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000569 HECT_dom 847 1134
No external refs found!