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  5. Solyc09g009190.4.1

Solyc09g009190.4.1


Description : starch branching enzyme


Gene families : OG0001006 (Archaeplastida) Phylogenetic Tree(s): OG0001006_tree ,
OG_05_0002115 (LandPlants) Phylogenetic Tree(s): OG_05_0002115_tree ,
OG_06_0006934 (SeedPlants) Phylogenetic Tree(s): OG_06_0006934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g009190.4.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.13 Archaeplastida
AT5G03650 SBE2.2 starch branching enzyme 2.2 0.03 Archaeplastida
Cpa|evm.model.tig00021432.19 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
Cre06.g289850 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Cre10.g444700 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
GSVIVT01008673001 No alias Carbohydrate metabolism.starch... 0.05 Archaeplastida
GSVIVT01033801001 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
LOC_Os02g32660.1 No alias starch branching enzyme 0.03 Archaeplastida
LOC_Os06g51084.1 No alias starch branching enzyme 0.03 Archaeplastida
MA_15024g0020 No alias 1,4-alpha-glucan-branching enzyme 1,... 0.04 Archaeplastida
Mp7g15230.1 No alias starch branching enzyme 0.03 Archaeplastida
Pp3c5_8810V3.1 No alias starch branching enzyme 2.1 0.04 Archaeplastida
Smo437348 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Zm00001e008234_P001 No alias starch branching enzyme 0.03 Archaeplastida
Zm00001e013321_P002 No alias starch branching enzyme 0.04 Archaeplastida
Zm00001e014711_P001 No alias starch branching enzyme 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 759 853
IPR004193 Glyco_hydro_13_N 221 304
IPR006047 Glyco_hydro_13_cat_dom 370 441
No external refs found!