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  5. Solyc09g009290.3.1

Solyc09g009290.3.1


Description : Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana (sp|q9sqk3|em506_arath : 283.0)


Gene families : OG0003292 (Archaeplastida) Phylogenetic Tree(s): OG0003292_tree ,
OG_05_0002383 (LandPlants) Phylogenetic Tree(s): OG_05_0002383_tree ,
OG_06_0002550 (SeedPlants) Phylogenetic Tree(s): OG_06_0002550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g009290.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT5G40160 EMB139, EMB506 Ankyrin repeat family protein 0.02 Archaeplastida
GSVIVT01005198001 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.05 Archaeplastida
Gb_02757 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_04520 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.05 Archaeplastida
LOC_Os03g04300.3 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.03 Archaeplastida
LOC_Os06g13000.1 No alias Ankyrin repeat domain-containing protein EMB506,... 0.04 Archaeplastida
Mp4g14600.1 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.07 Archaeplastida
Zm00001e025292_P002 No alias Ankyrin repeat domain-containing protein EMB506,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 197 282
No external refs found!