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  5. Solyc09g010720.3.1

Solyc09g010720.3.1


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana (sp|q9m2z2|wdr5a_arath : 85.9)


Gene families : OG0000619 (Archaeplastida) Phylogenetic Tree(s): OG0000619_tree ,
OG_05_0000400 (LandPlants) Phylogenetic Tree(s): OG_05_0000400_tree ,
OG_06_0000268 (SeedPlants) Phylogenetic Tree(s): OG_06_0000268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g010720.3.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268480 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
AMTR_s00175p00024710 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.02 Archaeplastida
LOC_Os11g08400.1 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.02 Archaeplastida
Pp3c10_15710V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Zm00001e000107_P001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida
Zm00001e006528_P001 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 397 429
IPR001680 WD40_repeat 563 600
IPR001680 WD40_repeat 710 734
IPR001680 WD40_repeat 522 558
No external refs found!