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  5. Solyc09g010860.4.1

Solyc09g010860.4.1


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g010860.4.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00077p00060330 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00119p00058870 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.05 Archaeplastida
AT1G26770 ATEXPA10,... expansin A10 0.02 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.06 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.06 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.05 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Archaeplastida
AT5G39260 EXPA21, EXP21,... expansin A21 0.04 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.03 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.05 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01035233001 No alias Expansin-A13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01048 No alias alpha-class expansin 0.05 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.02 Archaeplastida
Gb_07436 No alias Expansin-A4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.05 Archaeplastida
Gb_28036 No alias Expansin-A29 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os04g49410.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_10232070g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_184474g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.05 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_6583g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.05 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.05 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.06 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.05 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.04 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c8_13450V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_13470V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.03 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc06g076220.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e037578_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e040578_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006751 glutathione catabolic process IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0042219 cellular modified amino acid catabolic process IEP Neighborhood
BP GO:0043171 peptide catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 170 247
IPR009009 RlpA-like_DPBB 73 159
No external refs found!