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  5. Solyc09g014765.1.1

Solyc09g014765.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 196.0)


Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g014765.1.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Solyc01g057133.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc02g076635.1.1 No alias No annotation 0.06 Archaeplastida
Solyc06g009975.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g031714.1.1 No alias No annotation 0.05 Archaeplastida
Solyc07g019465.1.1 No alias No annotation 0.06 Archaeplastida
Solyc08g065675.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc09g015535.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc09g031513.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g013655.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 2 106
No external refs found!