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  5. Solyc09g015080.3.1

Solyc09g015080.3.1


Description : Patellin-6 OS=Arabidopsis thaliana (sp|q9scu1|patl6_arath : 631.0)


Gene families : OG0000809 (Archaeplastida) Phylogenetic Tree(s): OG0000809_tree ,
OG_05_0000939 (LandPlants) Phylogenetic Tree(s): OG_05_0000939_tree ,
OG_06_0008933 (SeedPlants) Phylogenetic Tree(s): OG_06_0008933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g015080.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00086020 evm_27.TU.AmTr_v1... Patellin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G09160 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.04 Archaeplastida
Zm00001e026912_P001 No alias Patellin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e031502_P004 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 65 118
IPR001251 CRAL-TRIO_dom 141 302
No external refs found!