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  5. Solyc09g015260.1.1

Solyc09g015260.1.1


Description : NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Coffea arabica (sp|p0cc48|nu2c1_cofar : 181.0)


Gene families : OG0001688 (Archaeplastida) Phylogenetic Tree(s): OG0001688_tree ,
OG_05_0001178 (LandPlants) Phylogenetic Tree(s): OG_05_0001178_tree ,
OG_06_0000636 (SeedPlants) Phylogenetic Tree(s): OG_06_0000636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g015260.1.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
ATCG00890 NDHB.1 NADH-Ubiquinone/plastoquinone (complex I) protein 0.01 Archaeplastida
ATCG01250 NDHB.2 NADH-Ubiquinone/plastoquinone (complex I) protein 0.01 Archaeplastida
Solyc00g500146.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 Archaeplastida
Solyc00g500299.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.02 Archaeplastida
Solyc01g017170.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.02 Archaeplastida
Solyc03g122010.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.02 Archaeplastida
Solyc06g009580.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g050069.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.03 Archaeplastida
Solyc09g050070.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.03 Archaeplastida
Solyc10g061887.1.1 No alias component NdhB of NDH membrane subcomplex M 0.03 Archaeplastida
Solyc11g021090.3.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 Archaeplastida
Solyc12g033080.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 6 119
No external refs found!