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  5. Solyc09g015290.1.1

Solyc09g015290.1.1


Description : Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea arabica (sp|a0a335|psaa_cofar : 99.4)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0000861 (SeedPlants) Phylogenetic Tree(s): OG_06_0000861_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g015290.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Solyc02g036320.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Zea... 0.04 Archaeplastida
Solyc12g032970.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.17 Archaeplastida
Solyc12g033060.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.01 Archaeplastida
Solyc12g035730.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g062610.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Citrus... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 42 70
No external refs found!