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  5. Solyc09g015660.4.1

Solyc09g015660.4.1


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0003220 (LandPlants) Phylogenetic Tree(s): OG_05_0003220_tree ,
OG_06_0004775 (SeedPlants) Phylogenetic Tree(s): OG_06_0004775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g015660.4.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G73150 GTE3 global transcription factor group E3 0.03 Archaeplastida
AT2G34900 GTE1, GTE01, IMB1 Transcription factor GTE6 0.02 Archaeplastida
Gb_06011 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029954_P002 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 107 191
No external refs found!