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  5. AMTR_s00029p00230160

AMTR_s00029p00230160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.364

Description : Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana


Gene families : OG0026637 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0020444 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019641 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00230160
Cluster HCCA: Cluster_52


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 176 202
IPR002885 Pentatricopeptide_repeat 204 233
IPR002885 Pentatricopeptide_repeat 101 148
No external refs found!