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  5. Solyc09g031940.1.1

Solyc09g031940.1.1


Description : Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana (sp|q9c9z2|rer3_arath : 331.0)


Gene families : OG0003344 (Archaeplastida) Phylogenetic Tree(s): OG0003344_tree ,
OG_05_0004099 (LandPlants) Phylogenetic Tree(s): OG_05_0004099_tree ,
OG_06_0005505 (SeedPlants) Phylogenetic Tree(s): OG_06_0005505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g031940.1.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.33 No alias Protein RETICULATA-RELATED 1, chloroplastic... 0.01 Archaeplastida
Cre16.g678000 No alias Protein RETICULATA-RELATED 3, chloroplastic... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0032465 regulation of cytokinesis IEP Neighborhood
BP GO:0032954 regulation of cytokinetic process IEP Neighborhood
BP GO:0032955 regulation of division septum assembly IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901891 regulation of cell septum assembly IEP Neighborhood
BP GO:1902412 regulation of mitotic cytokinesis IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
BP GO:1903436 regulation of mitotic cytokinetic process IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 111 278
No external refs found!