Solyc09g042725.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 214.0)


Gene families : OG0000940 (Archaeplastida) Phylogenetic Tree(s): OG0000940_tree ,
OG_05_0000578 (LandPlants) Phylogenetic Tree(s): OG_05_0000578_tree ,
OG_06_0000281 (SeedPlants) Phylogenetic Tree(s): OG_06_0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g042725.1.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Solyc02g005335.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc03g034394.1.1 No alias No annotation 0.05 Archaeplastida
Solyc03g082845.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc05g006325.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g009015.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Solyc06g048943.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc07g015873.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Solyc10g051255.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc12g042215.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 2 82
No external refs found!