AMTR_s00029p00235620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.386

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP4 component


Gene families : OG0004019 (Archaeplastida) Phylogenetic Tree(s): OG0004019_tree ,
OG_05_0003076 (LandPlants) Phylogenetic Tree(s): OG_05_0003076_tree ,
OG_06_0010571 (SeedPlants) Phylogenetic Tree(s): OG_06_0010571_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00235620
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT2G21290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
AT2G38140 PSRP4 plastid-specific ribosomal protein 4 0.04 Archaeplastida
LOC_Os05g09400.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_202598g0010 No alias component psPSRP4 of small ribosomal subunit proteome 0.02 Archaeplastida
Mp1g04130.1 No alias component psPSRP4 of small ribosomal subunit proteome 0.03 Archaeplastida
Pp3c9_12290V3.1 No alias plastid-specific ribosomal protein 4 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008937 ferredoxin-NAD(P) reductase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!