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  5. AMTR_s00029p00236200

AMTR_s00029p00236200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.390

Description : Receptor-like protein 7 OS=Arabidopsis thaliana


Gene families : OG0000160 (Archaeplastida) Phylogenetic Tree(s): OG0000160_tree ,
OG_05_0000080 (LandPlants) Phylogenetic Tree(s): OG_05_0000080_tree ,
OG_06_0000235 (SeedPlants) Phylogenetic Tree(s): OG_06_0000235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00236200
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012224001 No alias LRR receptor-like serine/threonine-protein kinase RPK2... 0.02 Archaeplastida
GSVIVT01028817001 No alias Receptor-like protein EIX2 OS=Solanum lycopersicum 0.03 Archaeplastida
GSVIVT01028960001 No alias Receptor-like protein EIX2 OS=Solanum lycopersicum 0.05 Archaeplastida
Gb_01901 No alias no description available(sp|q9srl2|rlp34_arath : 160.0) 0.02 Archaeplastida
Gb_05285 No alias no description available(sp|q9s9u3|rlp53_arath : 222.0) 0.02 Archaeplastida
Gb_05286 No alias Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.01 Archaeplastida
Solyc07g008590.1.1 No alias Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 28 65
IPR001611 Leu-rich_rpt 643 661
IPR001611 Leu-rich_rpt 713 734
IPR001611 Leu-rich_rpt 664 682
IPR001611 Leu-rich_rpt 447 468
IPR025875 Leu-rich_rpt_4 96 134
No external refs found!