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  5. Solyc09g059970.3.1

Solyc09g059970.3.1


Description : ubiquitin-fold protein (SUMO)


Gene families : OG0000850 (Archaeplastida) Phylogenetic Tree(s): OG0000850_tree ,
OG_05_0002291 (LandPlants) Phylogenetic Tree(s): OG_05_0002291_tree ,
OG_06_0004741 (SeedPlants) Phylogenetic Tree(s): OG_06_0004741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g059970.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G32765 SUMO5, ATSUMO5, SUM5 small ubiquitinrelated modifier 5 0.01 Archaeplastida
AT4G26840 SUMO1, SUMO 1,... small ubiquitin-like modifier 1 0.05 Archaeplastida
AT5G55160 SUMO2, ATSUMO2,... small ubiquitin-like modifier 2 0.05 Archaeplastida
Solyc12g006003.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022617 Rad60/SUMO-like_dom 21 91
No external refs found!