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  5. Solyc09g060080.4.1

Solyc09g060080.4.1


Description : component EAF1 of NuA4 histone acetyltransferase complex


Gene families : OG0002496 (Archaeplastida) Phylogenetic Tree(s): OG0002496_tree ,
OG_05_0002072 (LandPlants) Phylogenetic Tree(s): OG_05_0002072_tree ,
OG_06_0003303 (SeedPlants) Phylogenetic Tree(s): OG_06_0003303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g060080.4.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00248140 No alias Chromatin modification-related protein EAF1 B... 0.03 Archaeplastida
AMTR_s00045p00026940 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 A... 0.02 Archaeplastida
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.06 Archaeplastida
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.11 Archaeplastida
GSVIVT01028685001 No alias Chromatin modification-related protein EAF1 A... 0.11 Archaeplastida
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.06 Archaeplastida
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.06 Archaeplastida
LOC_Os05g51550.1 No alias Chromatin modification-related protein EAF1 B... 0.03 Archaeplastida
LOC_Os08g08000.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.06 Archaeplastida
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.05 Archaeplastida
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.05 Archaeplastida
Pp3c26_13270V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.12 Archaeplastida
Pp3c26_13460V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.09 Archaeplastida
Pp3c26_13463V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.03 Archaeplastida
Pp3c4_31630V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.07 Archaeplastida
Pp3c7_10800V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.08 Archaeplastida
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.03 Archaeplastida
Zm00001e020520_P002 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.07 Archaeplastida
Zm00001e020521_P001 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.03 Archaeplastida
Zm00001e026671_P001 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR014012 HSA_dom 628 666
No external refs found!