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  5. AMTR_s00029p00240590

AMTR_s00029p00240590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.411

Description : Solute transport.channels.AMT family.ammonium transporter (AMT1-type)


Gene families : OG0000704 (Archaeplastida) Phylogenetic Tree(s): OG0000704_tree ,
OG_05_0001036 (LandPlants) Phylogenetic Tree(s): OG_05_0001036_tree ,
OG_06_0001261 (SeedPlants) Phylogenetic Tree(s): OG_06_0001261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00240590
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g43070.1 No alias ammonium transporter (AMT1) 0.05 Archaeplastida
MA_60300g0010 No alias ammonium transporter (AMT1) 0.03 Archaeplastida
Pp3s397_10V3.1 No alias ammonium transporter 1;1 0.03 Archaeplastida
Pp3s397_40V3.1 No alias ammonium transporter 1;2 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 17 432
No external refs found!