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Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g061890.3.1 | |
| Cluster | HCCA: Cluster_232 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
| AT1G30350 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
| AT4G13210 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
| AT5G09280 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01000592001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.06 | Archaeplastida | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| GSVIVT01029048001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| Gb_02248 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| LOC_Os02g12300.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| LOC_Os04g05050.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| LOC_Os06g38510.2 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_101171g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| MA_10205415g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| MA_10426822g0020 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| MA_10437227g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_170547g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| MA_204440g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.04 | Archaeplastida | |
| MA_394910g0010 | No alias | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| MA_476625g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_62112g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_91467g0010 | No alias | pectate lyase | 0.06 | Archaeplastida | |
| MA_91467g0020 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_956526g0010 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| MA_97947g0010 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| Mp3g01000.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Mp8g00770.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| Pp3c13_1640V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c17_16370V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_10180V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| Pp3c1_10470V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| Pp3c1_33130V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c21_16990V3.1 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
| Pp3c22_19760V3.1 | No alias | Pectate lyase family protein | 0.04 | Archaeplastida | |
| Pp3c22_19780V3.1 | No alias | Pectate lyase family protein | 0.04 | Archaeplastida | |
| Pp3c2_9460V3.1 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
| Pp3s38_30V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| Solyc02g031960.3.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc06g071840.3.1 | No alias | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Solyc06g083580.4.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| Solyc09g008380.3.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| Zm00001e004654_P002 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Zm00001e024959_P001 | No alias | pectate lyase | 0.05 | Archaeplastida | |
| Zm00001e037311_P001 | No alias | pectate lyase | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006952 | defense response | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 174 | 355 |
| No external refs found! |