Solyc09g064440.4.1

Description : subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000437 (LandPlants) Phylogenetic Tree(s): OG_05_0000437_tree ,
OG_06_0010633 (SeedPlants) Phylogenetic Tree(s): OG_06_0010633_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g064440.4.1
Cluster	HCCA: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
AT1G30420	ATMRP12, MRP12, ABCC11	multidrug resistance-associated protein 12	0.02	Archaeplastida
GSVIVT01014631001	No alias	ABC transporter C family member 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01014633001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
MA_101915g0010	No alias	ABC transporter C family member 6 OS=Arabidopsis...	0.03	Archaeplastida
MA_10426119g0010	No alias	ABC transporter C family member 2 OS=Arabidopsis...	0.02	Archaeplastida
MA_10434414g0010	No alias	ABC transporter C family member 1 OS=Arabidopsis...	0.02	Archaeplastida
Smo145432	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo267218	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	660	793
IPR003439	ABC_transporter-like	1302	1450
IPR011527	ABC1_TM_dom	969	1211
IPR011527	ABC1_TM_dom	331	595

External Links

No external refs found!

Solyc09g064440.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation