AMTR_s00029p00242220 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.420

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0010475 (SeedPlants) Phylogenetic Tree(s): OG_06_0010475_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00029p00242220
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AT2G36380	PDR6, ATPDR6	pleiotropic drug resistance 6	0.03	Archaeplastida
Cpa\|evm.model.tig00020537.52	No alias	ABC transporter G family member 17 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00020902.2	No alias	ABC transporter G family member 29 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01016998001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01031314001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01031377001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01035715001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01035784001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01035785001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01035786001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_37007	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g52560.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10435419g0010	No alias	ABC transporter G family member 35 OS=Oryza sativa...	0.03	Archaeplastida
MA_84624g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Pp3c18_21520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Smo101338	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo133564	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo412710	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo424638	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo424639	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g098210.3.1	No alias	subfamily ABCG transporter	0.07	Archaeplastida
Solyc12g100190.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e037233_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004421	hydroxymethylglutaryl-CoA synthase activity	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	898	1026
IPR003439	ABC_transporter-like	196	353
IPR013581	PDR_assoc	725	789
IPR013525	ABC_2_trans	509	720
IPR013525	ABC_2_trans	1171	1384

External Links

No external refs found!

AMTR_s00029p00242220 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation