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Description : plastidial ribosome biogenesis factor (PAC)
Gene families : OG0007586 (Archaeplastida) Phylogenetic Tree(s): OG0007586_tree ,
OG_05_0008149 (LandPlants) Phylogenetic Tree(s): OG_05_0008149_tree ,
OG_06_0010570 (SeedPlants) Phylogenetic Tree(s): OG_06_0010570_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g064790.3.1 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G48120 | PAC | pale cress protein (PAC) | 0.17 | Archaeplastida | |
| LOC_Os05g32680.1 | No alias | plastidial ribosome biogenesis factor (PAC) | 0.03 | Archaeplastida | |
| Mp6g13250.1 | No alias | plastidial ribosome biogenesis factor (PAC) | 0.02 | Archaeplastida | |
| Pp3c5_15510V3.1 | No alias | pale cress protein (PAC) | 0.03 | Archaeplastida | |
| Zm00001e031603_P002 | No alias | plastidial ribosome biogenesis factor (PAC) | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016972 | thiol oxidase activity | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |