Solyc09g065540.3.1

Description : subunit alpha of methylcrotonoyl-CoA carboxylase complex

Gene families : OG0001090 (Archaeplastida) Phylogenetic Tree(s): OG0001090_tree ,
OG_05_0001880 (LandPlants) Phylogenetic Tree(s): OG_05_0001880_tree ,
OG_06_0002799 (SeedPlants) Phylogenetic Tree(s): OG_06_0002799_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g065540.3.1
Cluster	HCCA: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
AT1G03090	MCCA	methylcrotonyl-CoA carboxylase alpha chain,...	0.03	Archaeplastida
Cre06.g278098	No alias	Amino acid metabolism.degradation.branched-chain amino...	0.07	Archaeplastida
Gb_08288	No alias	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.04	Archaeplastida
LOC_Os12g41250.1	No alias	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.04	Archaeplastida
Mp8g15290.1	No alias	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.03	Archaeplastida
Smo411779	No alias	Amino acid metabolism.degradation.branched-chain amino...	0.03	Archaeplastida
Zm00001e003196_P001	No alias	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005743	mitochondrial inner membrane	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006839	mitochondrial transport	IEP	Neighborhood
BP	GO:0006848	pyruvate transport	IEP	Neighborhood
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015718	monocarboxylic acid transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
CC	GO:0019866	organelle inner membrane	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0098656	anion transmembrane transport	IEP	Neighborhood
BP	GO:1901475	pyruvate transmembrane transport	IEP	Neighborhood
BP	GO:1903825	organic acid transmembrane transport	IEP	Neighborhood
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Neighborhood
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005482	Biotin_COase_C	374	482
IPR000089	Biotin_lipoyl	666	731
IPR005481	BC-like_N	39	147
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	152	360

External Links

No external refs found!