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  5. Solyc09g065590.3.1

Solyc09g065590.3.1


Description : VAN3-binding protein OS=Arabidopsis thaliana (sp|q8w4k5|vab_arath : 357.0)


Gene families : OG0001229 (Archaeplastida) Phylogenetic Tree(s): OG0001229_tree ,
OG_05_0000856 (LandPlants) Phylogenetic Tree(s): OG_05_0000856_tree ,
OG_06_0001397 (SeedPlants) Phylogenetic Tree(s): OG_06_0001397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065590.3.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT3G63300 FKD1 FORKED 1 0.07 Archaeplastida
AT4G14740 No alias Plant protein of unknown function (DUF828) with plant... 0.05 Archaeplastida
GSVIVT01001202001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01018032001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os10g41060.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g41140.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e012419_P002 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037874_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013666 PH_pln 373 478
IPR008546 DUF828 15 329
No external refs found!