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  5. Solyc09g065820.4.1

Solyc09g065820.4.1


Description : transcription factor (bHLH)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000521 (LandPlants) Phylogenetic Tree(s): OG_05_0000521_tree ,
OG_06_0000874 (SeedPlants) Phylogenetic Tree(s): OG_06_0000874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065820.4.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
AT1G18400 BEE1 BR enhanced expression 1 0.03 Archaeplastida
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.02 Archaeplastida
AT2G24260 LRL1 LJRHL1-like 1 0.04 Archaeplastida
GSVIVT01000717001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01004930001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01008093001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01011873001 No alias External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
GSVIVT01018094001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
GSVIVT01020121001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01021032001 No alias External stimuli response.light.UV-A/blue... 0.07 Archaeplastida
Gb_05320 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_21366 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22201 No alias transcription factor (bHLH) 0.06 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os02g39140.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
LOC_Os02g47660.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
LOC_Os03g12940.1 No alias transcription factor (bHLH). component FBX of SCF E3... 0.03 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os09g33580.2 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os11g25560.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_90272g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc06g072520.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc06g083170.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc12g098620.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Zm00001e011084_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e015045_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e016117_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e021418_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022005_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e023327_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Zm00001e023698_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034528_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 57 101
No external refs found!