Solyc09g065840.3.1


Description : ssDNA-binding protein (OSB)


Gene families : OG0001359 (Archaeplastida) Phylogenetic Tree(s): OG0001359_tree ,
OG_05_0001061 (LandPlants) Phylogenetic Tree(s): OG_05_0001061_tree ,
OG_06_0003420 (SeedPlants) Phylogenetic Tree(s): OG_06_0003420_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065840.3.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Gb_13980 No alias ssDNA-binding protein (OSB) 0.03 Archaeplastida
LOC_Os03g43420.1 No alias ssDNA-binding protein (OSB) 0.05 Archaeplastida
MA_10436156g0010 No alias ssDNA-binding protein (OSB) 0.02 Archaeplastida
Zm00001e012422_P001 No alias ssDNA-binding protein (OSB) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 89 182
No external refs found!