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  5. Solyc09g066300.3.1

Solyc09g066300.3.1


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0002509 (SeedPlants) Phylogenetic Tree(s): OG_06_0002509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g066300.3.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00161410 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G24580 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G49230 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G63840 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.06 Archaeplastida
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.04 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.04 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22087 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15020.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.08 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34610.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g30310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_222729g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6934973g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_71146g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_9515738g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Mp4g15970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c13_4710V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo412607 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo8844 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g096650.3.1 No alias Putative RING-H2 finger protein ATL69 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g105610.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc06g051250.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005280.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007122_P001 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016092_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025397_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030102_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034907_P001 No alias RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e037107_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 130 173
No external refs found!