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  5. Solyc09g072670.3.1

Solyc09g072670.3.1


Description : guanine nucleotide dissociation inhibitor (RopGDI)


Gene families : OG0001502 (Archaeplastida) Phylogenetic Tree(s): OG0001502_tree ,
OG_05_0001033 (LandPlants) Phylogenetic Tree(s): OG_05_0001033_tree ,
OG_06_0013829 (SeedPlants) Phylogenetic Tree(s): OG_06_0013829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g072670.3.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Pp3c3_32980V3.1 No alias Immunoglobulin E-set superfamily protein 0.03 Archaeplastida
Pp3c3_33010V3.1 No alias Immunoglobulin E-set superfamily protein 0.02 Archaeplastida
Zm00001e027138_P001 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.02 Archaeplastida
Zm00001e031533_P001 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
InterPro domains Description Start Stop
IPR000406 Rho_GDI 30 219
No external refs found!