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  5. Solyc09g074120.3.1

Solyc09g074120.3.1


Description : Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana (sp|q0wpj7|rf298_arath : 219.0)


Gene families : OG0009299 (Archaeplastida) Phylogenetic Tree(s): OG0009299_tree ,
OG_05_0009169 (LandPlants) Phylogenetic Tree(s): OG_05_0009169_tree ,
OG_06_0003957 (SeedPlants) Phylogenetic Tree(s): OG_06_0003957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g074120.3.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Solyc09g074170.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!