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  5. Solyc09g082560.4.1

Solyc09g082560.4.1


Description : no hits & (original description: none)


Gene families : OG0002180 (Archaeplastida) Phylogenetic Tree(s): OG0002180_tree ,
OG_05_0001388 (LandPlants) Phylogenetic Tree(s): OG_05_0001388_tree ,
OG_06_0000687 (SeedPlants) Phylogenetic Tree(s): OG_06_0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g082560.4.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT4G14750 IQD19 IQ-domain 19 0.08 Archaeplastida
Gb_37382 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g09470.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g06570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g28420.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR025064 DUF4005 327 399
IPR000048 IQ_motif_EF-hand-BS 163 177
IPR000048 IQ_motif_EF-hand-BS 138 156
No external refs found!