1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g090350.3.1

Solyc09g090350.3.1


Description : Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus (sp|b5wwz8|fao1_lotja : 881.0)


Gene families : OG0001126 (Archaeplastida) Phylogenetic Tree(s): OG0001126_tree ,
OG_05_0000902 (LandPlants) Phylogenetic Tree(s): OG_05_0000902_tree ,
OG_06_0001093 (SeedPlants) Phylogenetic Tree(s): OG_06_0001093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090350.3.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT3G23410 FAO3, ATFAO3 fatty alcohol oxidase 3 0.03 Archaeplastida
Gb_20886 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.05 Archaeplastida
Gb_32371 No alias Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus... 0.04 Archaeplastida
Gb_39870 No alias Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g40840.1 No alias Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus... 0.03 Archaeplastida
LOC_Os10g33520.1 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.03 Archaeplastida
MA_10037718g0010 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.04 Archaeplastida
MA_10427421g0010 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.02 Archaeplastida
MA_232327g0010 No alias Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004591_P002 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.02 Archaeplastida
Zm00001e023010_P002 No alias Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 593 725
IPR000172 GMC_OxRdtase_N 233 499
No external refs found!