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  5. Solyc09g090630.3.1

Solyc09g090630.3.1


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002157 (Archaeplastida) Phylogenetic Tree(s): OG0002157_tree ,
OG_05_0001573 (LandPlants) Phylogenetic Tree(s): OG_05_0001573_tree ,
OG_06_0002209 (SeedPlants) Phylogenetic Tree(s): OG_06_0002209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090630.3.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT5G43990 SDG18, SUVR2 SET-domain containing protein lysine methyltransferase... 0.03 Archaeplastida
GSVIVT01023397001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
GSVIVT01027907001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
GSVIVT01028411001 No alias Chromatin organisation.histone modifications.histone... 0.05 Archaeplastida
Zm00001e003847_P002 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e022012_P001 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR018848 WIYLD_domain 5 61
IPR007728 Pre-SET_dom 469 615
IPR001214 SET_dom 635 756
No external refs found!