1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g091180.3.1

Solyc09g091180.3.1


Description : chaperone (Hsp60)


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001839 (LandPlants) Phylogenetic Tree(s): OG_05_0001839_tree ,
OG_06_0002105 (SeedPlants) Phylogenetic Tree(s): OG_06_0002105_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g091180.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.11 Archaeplastida
AT2G33210 HSP60-2 heat shock protein 60-2 0.03 Archaeplastida
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre06.g309100 No alias External stimuli response.temperature.Hsp... 0.1 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
GSVIVT01029025001 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
GSVIVT01031526001 No alias External stimuli response.temperature.Hsp... 0.1 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.06 Archaeplastida
MA_10436772g0010 No alias chaperone (Hsp60) 0.03 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.02 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Pp3c16_4660V3.1 No alias chaperonin 60 beta 0.05 Archaeplastida
Pp3c24_12180V3.1 No alias chaperonin-60alpha 0.05 Archaeplastida
Pp3c26_2180V3.1 No alias heat shock protein 60 0.03 Archaeplastida
Pp3c27_5110V3.1 No alias chaperonin 60 beta 0.02 Archaeplastida
Pp3c4_22500V3.1 No alias heat shock protein 60 0.08 Archaeplastida
Smo165043 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc01g028810.3.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Solyc11g069790.2.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Zm00001e004641_P001 No alias chaperone (Hsp60) 0.04 Archaeplastida
Zm00001e006438_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.15 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
Zm00001e032273_P004 No alias chaperone (Hsp60) 0.03 Archaeplastida
Zm00001e036666_P003 No alias subunit beta of Cpn60 chaperonin complex. component... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 54 555
No external refs found!