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  5. Solyc09g092530.4.1

Solyc09g092530.4.1


Description : component Tic22 of inner envelope TIC translocation system


Gene families : OG0002341 (Archaeplastida) Phylogenetic Tree(s): OG0002341_tree ,
OG_05_0002711 (LandPlants) Phylogenetic Tree(s): OG_05_0002711_tree ,
OG_06_0012062 (SeedPlants) Phylogenetic Tree(s): OG_06_0012062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g092530.4.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00126070 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.03 Archaeplastida
AT4G33350 No alias Tic22-like family protein 0.05 Archaeplastida
Pp3c16_18870V3.1 No alias Tic22-like family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007378 Tic22-like 28 258
No external refs found!