Solyc09g098130.3.1

Description : Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum (sp|q6l3z4|r1b12_solde : 296.0)

Gene families : OG0002833 (Archaeplastida) Phylogenetic Tree(s): OG0002833_tree ,
OG_05_0001906 (LandPlants) Phylogenetic Tree(s): OG_05_0001906_tree ,
OG_06_0001059 (SeedPlants) Phylogenetic Tree(s): OG_06_0001059_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g098130.3.1
Cluster	HCCA: Cluster_244

Target	Alias	Description	ECC score	Gene Family Method
Solyc04g008130.3.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.04	Archaeplastida
Solyc04g008190.1.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.04	Archaeplastida
Solyc05g050430.2.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc09g098100.4.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	538	755

External Links

No external refs found!