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  5. Solyc09g098270.4.1

Solyc09g098270.4.1


Description : No annotation


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000273 (LandPlants) Phylogenetic Tree(s): OG_05_0000273_tree ,
OG_06_0000208 (SeedPlants) Phylogenetic Tree(s): OG_06_0000208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g098270.4.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT1G65570 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G80170 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Gb_12008 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g079130.2.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e017465_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!