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  5. Solyc09g098380.3.1

Solyc09g098380.3.1


Description : solute transporter (AAAP)


Gene families : OG0000208 (Archaeplastida) Phylogenetic Tree(s): OG0000208_tree ,
OG_05_0002453 (LandPlants) Phylogenetic Tree(s): OG_05_0002453_tree ,
OG_06_0008391 (SeedPlants) Phylogenetic Tree(s): OG_06_0008391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g098380.3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00061580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AMTR_s00010p00251660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AMTR_s00010p00252100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
AT3G54830 No alias Transmembrane amino acid transporter family protein 0.03 Archaeplastida
GSVIVT01011406001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
GSVIVT01020259001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01031484001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
LOC_Os01g41420.1 No alias solute transporter (AAAP) 0.02 Archaeplastida
LOC_Os04g38680.1 No alias solute transporter (AAAP) 0.04 Archaeplastida
LOC_Os11g19240.1 No alias solute transporter (AAAP) 0.05 Archaeplastida
Solyc03g013440.4.1 No alias solute transporter (AAAP) 0.03 Archaeplastida
Solyc05g053970.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008883_P001 No alias solute transporter (AAAP) 0.02 Archaeplastida
Zm00001e020612_P001 No alias solute transporter (AAAP) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 43 425
No external refs found!