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  5. AMTR_s00030p00122720

AMTR_s00030p00122720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.72

No description available


Gene families : OG0000241 (Archaeplastida) Phylogenetic Tree(s): OG0000241_tree ,
OG_05_0042648 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0037143 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00122720
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT3G54800 No alias Pleckstrin homology (PH) and lipid-binding START... 0.05 Archaeplastida
AT5G25010 No alias Protein of unknown function (DUF1336) 0.03 Archaeplastida
AT5G25020 No alias Protein of unknown function (DUF1336) 0.04 Archaeplastida
LOC_Os02g01270.1 No alias Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis... 0.07 Archaeplastida
MA_10435848g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c20_22150V3.1 No alias Pleckstrin homology (PH) and lipid-binding START... 0.02 Archaeplastida
Pp3c21_18410V3.1 No alias ENHANCED DISEASE RESISTANCE 2 0.02 Archaeplastida
Solyc04g025280.4.1 No alias Protein ENHANCED DISEASE RESISTANCE 2-like... 0.02 Archaeplastida
Zm00001e013146_P002 No alias Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 5 33
IPR002885 Pentatricopeptide_repeat 39 63
No external refs found!