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  5. Solyc09g150114.1.1

Solyc09g150114.1.1


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 137.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001291 (LandPlants) Phylogenetic Tree(s): OG_05_0001291_tree ,
OG_06_0001454 (SeedPlants) Phylogenetic Tree(s): OG_06_0001454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g150114.1.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Solyc01g056575.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Solyc01g057007.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Solyc02g036185.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc04g050745.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Solyc06g033787.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc07g032023.1.1 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Solyc08g041685.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Solyc09g018235.1.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc09g055185.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000477 RT_dom 2 92
No external refs found!