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  5. Solyc10g005850.4.1

Solyc10g005850.4.1


Description : no hits & (original description: none)


Gene families : OG0006805 (Archaeplastida) Phylogenetic Tree(s): OG0006805_tree ,
OG_05_0006683 (LandPlants) Phylogenetic Tree(s): OG_05_0006683_tree ,
OG_06_0005300 (SeedPlants) Phylogenetic Tree(s): OG_06_0005300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005850.4.1
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Cre09.g388430 No alias No description available 0.02 Archaeplastida
Gb_00628 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g19470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo418782 No alias No description available 0.02 Archaeplastida
Zm00001e031016_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001202 WW_dom 116 144
IPR001202 WW_dom 789 819
No external refs found!