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  5. Solyc10g005960.1.1

Solyc10g005960.1.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g005960.1.1
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270100 evm_27.TU.AmTr_v1... External stimuli response.salinity.SOS (Salt Overly... 0.04 Archaeplastida
AMTR_s00019p00223190 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.03 Archaeplastida
AT3G46550 SOS5 Fasciclin-like arabinogalactan family protein 0.05 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.05 Archaeplastida
AT5G55730 FLA1 FASCICLIN-like arabinogalactan 1 0.05 Archaeplastida
GSVIVT01024973001 No alias External stimuli response.salinity.SOS (Salt Overly... 0.04 Archaeplastida
GSVIVT01030085001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
LOC_Os02g26320.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g03600.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os04g48490.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os05g38500.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
LOC_Os08g23180.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os09g07350.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
MA_10436490g0010 No alias classical arabinogalactan protein. fasciclin-type... 0.03 Archaeplastida
MA_137299g0010 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Smo441324 No alias Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo55113 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Solyc03g112880.1.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
Zm00001e014115_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e031109_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e033729_P002 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 201 329
No external refs found!