Solyc10g006320.3.1


Description : component VPS22 of ESCRT-II complex


Gene families : OG0003783 (Archaeplastida) Phylogenetic Tree(s): OG0003783_tree ,
OG_05_0004618 (LandPlants) Phylogenetic Tree(s): OG_05_0004618_tree ,
OG_06_0004996 (SeedPlants) Phylogenetic Tree(s): OG_06_0004996_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006320.3.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g36020.1 No alias component VPS22 of ESCRT-II complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000814 ESCRT II complex IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0004140 dephospho-CoA kinase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!