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  5. Solyc10g006420.4.1

Solyc10g006420.4.1


Description : transcription factor (HD-ZIP IV)


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0088446 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006420.4.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00069p00091460 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.03 Archaeplastida
GSVIVT01001987001 No alias Homeobox-leucine zipper protein ROC7 OS=Oryza sativa... 0.03 Archaeplastida
Gb_18862 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os01g57890.1 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida
MA_110607g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_19830g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_93471g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 105 271
No external refs found!